Free software developed in our research projects
-
RGNet (constructs the smallest refining galled network from two input phylogenetic trees of arbitrary degrees), 2005.
-
CPDT-dist
(computes the rooted triplet distance between two input phylogenetic trees of arbitrary degrees), 2016.
-
Galled-CPDT-dist
(computes the rooted triplet distance between two input galled trees of arbitrary degrees), 2017.
-
ntd
(computes the rooted triplet distance between two input phylogenetic networks of arbitrary degrees and arbitrary levels), 2019.
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qMAXRTC
(an approximation algorithm for the q-MAXRTC problem) and
qtd
(a fast algorithm for the rooted triplet distance between
two input phylogenetic trees when one tree has few internal nodes), 2019.
-
L3N
(normalized L3-based link prediction in protein-protein interaction networks),
2023.
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